Van La, PhD

#Identification important markers for cell subtypes to classify cell subtypes

Classification of cell subtypes and/or feature selection

• LDA (Linear Discriminant Analysis)
• Naive Bayes
• SVM (Support Vector Machine)
• swLDA (Stepwise Linear Discriminant Analysis)
• Random Forest (RF)

Clustering and Classification of cell subtypes

• Hclust (Hierarchical Clustering)
• K-means (K-means Clustering)
• PCA (Principle Component Analysis)

Visualization

• Heatmap
• Plotting of 15 molecular markers from Random Forest results